Gene: lnc-FOXO1-2
Basic information
HGNC Gene Symbol:
LINC00548
?
HGNC Full Gene Name:
long intergenic non-protein coding RNA 548
Location (hg38): chr13:40079103-40535807
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA_gene
Transcripts: 34
Transcripts
| Transcript ID | Location (hg38) | Length |
|---|---|---|
| lnc-FOXO1-2:1 | chr13:40343957-40350303 | 444 bp |
| lnc-FOXO1-2:10 | chr13:40450994-40481006 | 702 bp |
| lnc-FOXO1-2:11 | chr13:40450936-40470249 | 1973 bp |
| lnc-FOXO1-2:12 | chr13:40458534-40466648 | 402 bp |
| lnc-FOXO1-2:14 | chr13:40478766-40481072 | 905 bp |
| lnc-FOXO1-2:15 | chr13:40296112-40481028 | 1943 bp |
| lnc-FOXO1-2:16 | chr13:40470087-40481025 | 528 bp |
| lnc-FOXO1-2:17 | chr13:40347132-40460351 | 3241 bp |
| lnc-FOXO1-2:18 | chr13:40314795-40439787 | 1297 bp |
| lnc-FOXO1-2:19 | chr13:40284777-40403766 | 1501 bp |
| lnc-FOXO1-2:2 | chr13:40194600-40344113 | 253 bp |
| lnc-FOXO1-2:20 | chr13:40079103-40377306 | 4220 bp |
| lnc-FOXO1-2:21 | chr13:40079103-40377306 | 4140 bp |
| lnc-FOXO1-2:22 | chr13:40079103-40377306 | 4389 bp |
| lnc-FOXO1-2:23 | chr13:40079103-40377306 | 4123 bp |
| lnc-FOXO1-2:24 | chr13:40342184-40377306 | 2472 bp |
| lnc-FOXO1-2:25 | chr13:40198074-40377261 | 1974 bp |
| lnc-FOXO1-2:26 | chr13:40349549-40350475 | 927 bp |
| lnc-FOXO1-2:27 | chr13:40082062-40350475 | 1040 bp |
| lnc-FOXO1-2:28 | chr13:40160702-40350475 | 1612 bp |
| lnc-FOXO1-2:29 | chr13:40321096-40350475 | 5351 bp |
| lnc-FOXO1-2:3 | chr13:40194509-40220502 | 2551 bp |
| lnc-FOXO1-2:30 | chr13:40335948-40350475 | 2079 bp |
| lnc-FOXO1-2:31 | chr13:40203617-40350313 | 1456 bp |
| lnc-FOXO1-2:32 | chr13:40079106-40273509 | 3541 bp |
| lnc-FOXO1-2:33 | chr13:40081824-40186842 | 1148 bp |
| lnc-FOXO1-2:34 | chr13:40347132-40481006 | 3974 bp |
| lnc-FOXO1-2:35 | chr13:40347132-40481006 | 3834 bp |
| lnc-FOXO1-2:4 | chr13:40450934-40481006 | 2088 bp |
| lnc-FOXO1-2:5 | chr13:40347134-40481006 | 3832 bp |
| lnc-FOXO1-2:6 | chr13:40347134-40481006 | 3970 bp |
| lnc-FOXO1-2:7 | chr13:40450931-40474095 | 3362 bp |
| lnc-FOXO1-2:8 | chr13:40340537-40347062 | 1774 bp |
| lnc-FOXO1-2:9 | chr13:40458903-40535807 | 483 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| lnc-FOXO1-2 | no | no | no | no |
Available literature
- Jeong (2016), Long noncoding RNA linc00598 regulates CCND2 transcription and modulates the G1 checkpoint., Sci Rep
- Qiao (2003), Identification of a novel fusion gene, TTL, fused to ETV6 in acute lymphoblastic leukemia with t(12;13)(p13;q14), and its implication in leukemogenesis., Leukemia