Gene: lnc-SOX5-5

Basic information

LNCipedia gene ID: lnc-SOX5-5 
Location (hg38): chr12:23563316-24563142
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA_gene
Transcripts: 37

Transcripts

Transcript IDLocation (hg38)Length
lnc-SOX5-5:1 chr12:24558495-24563142 4648 bp
lnc-SOX5-5:10 chr12:24560748-24562628 1161 bp
lnc-SOX5-5:11 chr12:24207638-24562628 1434 bp
lnc-SOX5-5:12 chr12:24213256-24562628 714 bp
lnc-SOX5-5:13 chr12:24213256-24562590 676 bp
lnc-SOX5-5:14 chr12:24174765-24562568 6710 bp
lnc-SOX5-5:15 chr12:24191408-24562568 675 bp
lnc-SOX5-5:16 chr12:24331286-24562544 576 bp
lnc-SOX5-5:17 chr12:24277250-24562493 559 bp
lnc-SOX5-5:18 chr12:24213342-24562487 409 bp
lnc-SOX5-5:19 chr12:24213342-24562459 381 bp
lnc-SOX5-5:2 chr12:23920332-24562912 1189 bp
lnc-SOX5-5:20 chr12:23734682-24562459 1116 bp
lnc-SOX5-5:21 chr12:23603441-24562459 2343 bp
lnc-SOX5-5:22 chr12:24055185-24562459 828 bp
lnc-SOX5-5:23 chr12:24180285-24562459 858 bp
lnc-SOX5-5:24 chr12:24277250-24562459 525 bp
lnc-SOX5-5:25 chr12:24331286-24562459 491 bp
lnc-SOX5-5:26 chr12:24367935-24562459 909 bp
lnc-SOX5-5:27 chr12:24367935-24562382 832 bp
lnc-SOX5-5:28 chr12:24057827-24362071 704 bp
lnc-SOX5-5:29 chr12:24180968-24362071 409 bp
lnc-SOX5-5:3 chr12:24180636-24562912 1260 bp
lnc-SOX5-5:30 chr12:24204198-24362071 410 bp
lnc-SOX5-5:31 chr12:24213117-24362071 538 bp
lnc-SOX5-5:32 chr12:24213343-24357430 265 bp
lnc-SOX5-5:33 chr12:23920038-23949592 606 bp
lnc-SOX5-5:34 chr12:23563316-23738506 576 bp
lnc-SOX5-5:35 chr12:23575813-23738506 570 bp
lnc-SOX5-5:36 chr12:23603921-23734715 855 bp
lnc-SOX5-5:37 chr12:23575659-23632194 376 bp
lnc-SOX5-5:4 chr12:24212845-24562912 1021 bp
lnc-SOX5-5:5 chr12:24176303-24562650 663 bp
lnc-SOX5-5:6 chr12:24177196-24562650 4443 bp
lnc-SOX5-5:7 chr12:24207592-24562650 1861 bp
lnc-SOX5-5:8 chr12:24213314-24562650 591 bp
lnc-SOX5-5:9 chr12:24213341-24562650 766 bp


Locus conservation

Locus conservation?
lnc-SOX5-5 yes no no no

Available literature

  1. Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med