Gene: TMEM161B-AS1
Basic information
LNCipedia gene ID: TMEM161B-AS1
Location (hg38): chr5:88268850-88439490
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA_gene
Transcripts: 72
Transcripts
| Transcript ID | Location (hg38) | Length |
|---|---|---|
| TMEM161B-AS1:1 | chr5:88268850-88290641 | 18802 bp |
| TMEM161B-AS1:10 | chr5:88269016-88436674 | 1109 bp |
| TMEM161B-AS1:11 | chr5:88269024-88286067 | 548 bp |
| TMEM161B-AS1:12 | chr5:88269024-88436674 | 1101 bp |
| TMEM161B-AS1:13 | chr5:88269024-88436674 | 680 bp |
| TMEM161B-AS1:14 | chr5:88269038-88287652 | 359 bp |
| TMEM161B-AS1:15 | chr5:88269039-88276222 | 409 bp |
| TMEM161B-AS1:16 | chr5:88269042-88436602 | 590 bp |
| TMEM161B-AS1:17 | chr5:88269044-88270430 | 1039 bp |
| TMEM161B-AS1:18 | chr5:88269044-88271070 | 621 bp |
| TMEM161B-AS1:19 | chr5:88269047-88287656 | 717 bp |
| TMEM161B-AS1:2 | chr5:88268882-88436674 | 608 bp |
| TMEM161B-AS1:20 | chr5:88269047-88269616 | 222 bp |
| TMEM161B-AS1:21 | chr5:88269050-88292755 | 570 bp |
| TMEM161B-AS1:22 | chr5:88270506-88287657 | 630 bp |
| TMEM161B-AS1:23 | chr5:88281297-88285851 | 1681 bp |
| TMEM161B-AS1:24 | chr5:88281671-88285881 | 726 bp |
| TMEM161B-AS1:25 | chr5:88281684-88288011 | 1336 bp |
| TMEM161B-AS1:26 | chr5:88281684-88291428 | 881 bp |
| TMEM161B-AS1:27 | chr5:88282052-88287637 | 514 bp |
| TMEM161B-AS1:28 | chr5:88282379-88288011 | 1141 bp |
| TMEM161B-AS1:29 | chr5:88282459-88291474 | 1014 bp |
| TMEM161B-AS1:3 | chr5:88268882-88436674 | 730 bp |
| TMEM161B-AS1:30 | chr5:88282459-88286990 | 1875 bp |
| TMEM161B-AS1:31 | chr5:88282459-88291474 | 686 bp |
| TMEM161B-AS1:32 | chr5:88282462-88287613 | 694 bp |
| TMEM161B-AS1:33 | chr5:88282512-88286037 | 649 bp |
| TMEM161B-AS1:34 | chr5:88282512-88291523 | 790 bp |
| TMEM161B-AS1:35 | chr5:88282569-88287720 | 580 bp |
| TMEM161B-AS1:36 | chr5:88282716-88288723 | 1547 bp |
| TMEM161B-AS1:37 | chr5:88282734-88285903 | 370 bp |
| TMEM161B-AS1:38 | chr5:88283072-88287652 | 343 bp |
| TMEM161B-AS1:39 | chr5:88285654-88288030 | 793 bp |
| TMEM161B-AS1:4 | chr5:88268895-88271133 | 741 bp |
| TMEM161B-AS1:40 | chr5:88285666-88292582 | 388 bp |
| TMEM161B-AS1:41 | chr5:88287086-88291474 | 628 bp |
| TMEM161B-AS1:42 | chr5:88292633-88293675 | 1043 bp |
| TMEM161B-AS1:43 | chr5:88390401-88437043 | 2064 bp |
| TMEM161B-AS1:44 | chr5:88390402-88437043 | 953 bp |
| TMEM161B-AS1:45 | chr5:88390402-88417234 | 230 bp |
| TMEM161B-AS1:46 | chr5:88392195-88417491 | 575 bp |
| TMEM161B-AS1:47 | chr5:88392195-88436674 | 672 bp |
| TMEM161B-AS1:48 | chr5:88392292-88436947 | 848 bp |
| TMEM161B-AS1:49 | chr5:88426695-88436366 | 201 bp |
| TMEM161B-AS1:5 | chr5:88268895-88271225 | 833 bp |
| TMEM161B-AS1:50 | chr5:88268891-88271225 | 837 bp |
| TMEM161B-AS1:51 | chr5:88268891-88273232 | 3880 bp |
| TMEM161B-AS1:52 | chr5:88268891-88281624 | 11386 bp |
| TMEM161B-AS1:53 | chr5:88268891-88292645 | 1707 bp |
| TMEM161B-AS1:54 | chr5:88268891-88323525 | 52461 bp |
| TMEM161B-AS1:55 | chr5:88268891-88323525 | 48049 bp |
| TMEM161B-AS1:56 | chr5:88268891-88436684 | 731 bp |
| TMEM161B-AS1:57 | chr5:88268891-88436685 | 610 bp |
| TMEM161B-AS1:58 | chr5:88269024-88276222 | 424 bp |
| TMEM161B-AS1:59 | chr5:88269024-88270430 | 1059 bp |
| TMEM161B-AS1:6 | chr5:88268916-88436685 | 585 bp |
| TMEM161B-AS1:60 | chr5:88269024-88270820 | 1405 bp |
| TMEM161B-AS1:61 | chr5:88269024-88281197 | 1616 bp |
| TMEM161B-AS1:62 | chr5:88269024-88287656 | 740 bp |
| TMEM161B-AS1:63 | chr5:88269024-88436674 | 1101 bp |
| TMEM161B-AS1:64 | chr5:88269024-88286067 | 548 bp |
| TMEM161B-AS1:65 | chr5:88269024-88289083 | 14196 bp |
| TMEM161B-AS1:66 | chr5:88269024-88292645 | 1357 bp |
| TMEM161B-AS1:67 | chr5:88269024-88292755 | 596 bp |
| TMEM161B-AS1:68 | chr5:88269024-88436602 | 608 bp |
| TMEM161B-AS1:69 | chr5:88270525-88287657 | 611 bp |
| TMEM161B-AS1:7 | chr5:88268938-88436684 | 684 bp |
| TMEM161B-AS1:70 | chr5:88274159-88283299 | 8533 bp |
| TMEM161B-AS1:71 | chr5:88392189-88417491 | 581 bp |
| TMEM161B-AS1:72 | chr5:88392189-88439490 | 3494 bp |
| TMEM161B-AS1:8 | chr5:88268938-88436668 | 703 bp |
| TMEM161B-AS1:9 | chr5:88269016-88436674 | 688 bp |
Locus conservation
Available literature
- Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res
- Sun (2014), Computational evidence of NAGNAG alternative splicing in human large intergenic noncoding RNA., Biomed Res Int
- Cabili (2011), Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses., Genes Dev.
- Chodroff (2010), Long noncoding RNA genes: conservation of sequence and brain expression among diverse amniotes., Genome Biol.