Transcript: lnc-PTGR2-1:5

Basic information

LNCipedia transcript ID: lnc-PTGR2-1:5 
LNCipedia gene ID: lnc-PTGR2-1
RefSeq ID: NR_109995
Location (hg38): chr14:73787360-73803628
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 984 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109995; NR_109995.1
Alternative gene names: LOC100506476


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.8269 non-coding 
CPAT coding probability 8.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTGR2-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTGR2-1:5
4.0 lnc-PTGR2-1:5
4.1 lnc-PTGR2-1:5
5.0 lnc-PTGR2-1:5
5.1 lnc-ACOT6-6:3
5.2 lnc-PTGR2-1:5