Transcript: lnc-MUC20-67:65

Basic information

LNCipedia transcript ID: lnc-MUC20-67:65 
LNCipedia gene ID: lnc-MUC20-67
Location (hg38): chr3:195696422-195701584
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 551 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000451982.1; AC069513.3-002; OTTHUMT00000341935.1
Alternative gene names: ENSG00000242086.2; AC069513.3; OTTHUMG00000155834.2; ; ENST00000453324


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.2871 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MUC20-67:65 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC069257.9.1-4:4
4.0 LINC00969:65
4.1 LINC00969:65
5.0 LINC00969:65
5.1 lnc-MUC20-13:65
5.2 lnc-MUC20-67:65