Transcript: lnc-MUC20-67:45

Basic information

LNCipedia transcript ID: lnc-MUC20-67:45 
HGNC Gene Symbol: lnc-MUC20-67    
HGNC Full Gene Name: MIR570 host gene
RefSeq ID: NR_122105
Location (hg38): chr3:195688498-195711875
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 940 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_122105; NR_122105.1
Alternative gene names: ; ENST00000453324; LINC00969


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 101.2939 coding 
CPAT coding probability 4.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MUC20-67:45 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC069257.9.1-4:74
4.0 LINC00969:45
4.1 LINC00969:45
5.0 LINC00969:45
5.1 lnc-MUC20-13:45
5.2 lnc-MUC20-67:45