Transcript: lnc-MUC20-67:117

Basic information

LNCipedia transcript ID: lnc-MUC20-67:117 
HGNC Gene Symbol: lnc-MUC20-67    
HGNC Full Gene Name: MUC20 overlapping transcript
Ensembl Gene ID: ENSG00000242086
Ensembl Transcript ID: ENST00000612098
Location (hg38): chr3:195708154-195722712
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 592 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612098.4
Alternative gene names: ENSG00000242086.8; LINC00969; ; ENST00000453324; MUC20-OT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.2097 non-coding 
CPAT coding probability 16.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MUC20-67:117 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC00969:128
4.1 LINC00969:128
5.0 LINC00969:128
5.1 lnc-MUC20-13:128
5.2 lnc-MUC20-67:117