Transcript: ZNF582-AS1:19

Basic information

LNCipedia transcript ID: ZNF582-AS1:19 
LNCipedia gene ID: ZNF582-AS1
Location (hg38): chr19:56393733-56399170
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1608 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00026799
Alternative gene names: XLOC_013167; linc-ZNF583-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.2668 non-coding 
CPAT coding probability 4.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF582-AS1:19 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF583-1:11
3.1 lnc-ZNF583-1:11
4.0 ZNF582-AS1:19
4.1 ZNF582-AS1:19
5.0 ZNF582-AS1:19
5.1 ZNF582-AS1:19
5.2 ZNF582-AS1:19