Transcript: TEX41:106

Basic information

LNCipedia transcript ID: TEX41:106 
LNCipedia gene ID: TEX41
Location (hg38): chr2:145259157-145261923
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 524 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT074832; FPKM1_group_17331_transcript_2
Alternative gene names: DKFZp686O1327; LINC00953


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.6102 non-coding 
CPAT coding probability 1.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TEX41:106 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP15-18:1
4.0 TEX41:106
4.1 TEX41:106
5.0 TEX41:106
5.1 TEX41:106
5.2 TEX41:106