Transcript: TEX41:100

Basic information

LNCipedia transcript ID: TEX41:100 
LNCipedia gene ID: TEX41
Location (hg38): chr2:145171998-145182509
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 531 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT074830; ENST00000604253.1
Alternative gene names: ENSG00000226674.4; TEX41; DKFZp686O1327; LINC00953


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.8302 non-coding 
CPAT coding probability 1.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TEX41:100 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP15-6:45
4.0 TEX41:100
4.1 TEX41:100
5.0 TEX41:100
5.1 TEX41:100
5.2 TEX41:100