Transcript: PDYN-AS1:8

Basic information

LNCipedia transcript ID: PDYN-AS1:8 
LNCipedia gene ID: PDYN-AS1
RefSeq ID: NR_134520
Location (hg38): chr20:1947210-2007517
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1838 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134520.1
Alternative gene names: LOC727993


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -116.2784 non-coding 
CPAT coding probability 8.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PDYN-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 PDYN-AS1:8
5.1 PDYN-AS1:8
5.2 PDYN-AS1:8