Transcript: PDYN-AS1:12

Basic information

LNCipedia transcript ID: PDYN-AS1:12 
LNCipedia gene ID: PDYN-AS1
Location (hg38): chr20:1946967-1969591
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4743 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233896.1|MICT00000212613.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.9788 non-coding 
CPAT coding probability 17.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PDYN-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SIRPA-2:4
5.0 lnc-SIRPA-2:4
5.1 PDYN-AS1:4
5.2 PDYN-AS1:12