Transcript: LINC01869:31

Basic information

LNCipedia transcript ID: LINC01869:31 
LNCipedia gene ID: LINC01869
Location (hg38): chr19:50818028-50818849
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 736 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027077; NONHSAT067374
Alternative gene names: XLOC_013119; linc-KLK3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -230.4789 non-coding 
CPAT coding probability 25.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01869:31 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC010325.1-1:5
3.1 lnc-AC010325.1-1:5
4.0 lnc-AC010325.1-1:5
4.1 lnc-AC010325.1-1:5
5.0 lnc-AC010325.1-1:5
5.1 LINC01869:16
5.2 LINC01869:31