Gene: lnc-BMP6-106

Basic information

LNCipedia gene ID: lnc-BMP6-106 
Location (hg38): chr6:8102711-9294133
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA_gene
Transcripts: 162

Transcripts

Transcript IDLocation (hg38)Length
lnc-BMP6-106:1 chr6:8102711-8342878 1062 bp
lnc-BMP6-106:10 chr6:8158162-8760447 866 bp
lnc-BMP6-106:100 chr6:8435722-8501635 979 bp
lnc-BMP6-106:101 chr6:8435751-8785443 1191 bp
lnc-BMP6-106:102 chr6:8435856-8785443 1069 bp
lnc-BMP6-106:103 chr6:8435873-8653799 734 bp
lnc-BMP6-106:104 chr6:8435893-8792230 1238 bp
lnc-BMP6-106:105 chr6:8435924-8989084 1218 bp
lnc-BMP6-106:106 chr6:8435949-8849041 896 bp
lnc-BMP6-106:107 chr6:8436000-8792264 2463 bp
lnc-BMP6-106:108 chr6:8436033-9294133 1783 bp
lnc-BMP6-106:109 chr6:8436133-8785435 782 bp
lnc-BMP6-106:11 chr6:8165512-8182862 997 bp
lnc-BMP6-106:110 chr6:8436135-9052423 3469 bp
lnc-BMP6-106:111 chr6:8436138-8790375 696 bp
lnc-BMP6-106:112 chr6:8436144-8841101 2543 bp
lnc-BMP6-106:113 chr6:8558585-8810394 1145 bp
lnc-BMP6-106:114 chr6:8558585-8756723 2060 bp
lnc-BMP6-106:115 chr6:8652137-8653846 556 bp
lnc-BMP6-106:116 chr6:8652137-8654237 947 bp
lnc-BMP6-106:117 chr6:8652209-8654226 500 bp
lnc-BMP6-106:118 chr6:8652209-8653847 485 bp
lnc-BMP6-106:119 chr6:8652209-8653846 484 bp
lnc-BMP6-106:12 chr6:8195576-8342495 1127 bp
lnc-BMP6-106:120 chr6:8652210-8657427 1667 bp
lnc-BMP6-106:121 chr6:8652262-8653814 1145 bp
lnc-BMP6-106:122 chr6:8678957-8755277 561 bp
lnc-BMP6-106:123 chr6:8776036-8785443 612 bp
lnc-BMP6-106:124 chr6:8783275-8786889 2836 bp
lnc-BMP6-106:125 chr6:8784027-8786845 2660 bp
lnc-BMP6-106:126 chr6:8784027-8785063 878 bp
lnc-BMP6-106:127 chr6:8784178-8785445 489 bp
lnc-BMP6-106:128 chr6:8788304-8792279 2466 bp
lnc-BMP6-106:129 chr6:8790115-8792258 634 bp
lnc-BMP6-106:13 chr6:8277527-8328277 565 bp
lnc-BMP6-106:130 chr6:8831502-8857622 1641 bp
lnc-BMP6-106:131 chr6:8835901-8841205 2563 bp
lnc-BMP6-106:132 chr6:8854773-8858389 581 bp
lnc-BMP6-106:133 chr6:8887938-8993096 1831 bp
lnc-BMP6-106:134 chr6:8906072-9096691 1714 bp
lnc-BMP6-106:135 chr6:8906078-8940358 2012 bp
lnc-BMP6-106:136 chr6:8906098-8925924 249 bp
lnc-BMP6-106:137 chr6:8906099-8931142 5534 bp
lnc-BMP6-106:138 chr6:8906099-8925924 247 bp
lnc-BMP6-106:139 chr6:8923691-8939589 1396 bp
lnc-BMP6-106:14 chr6:8283190-8342455 539 bp
lnc-BMP6-106:140 chr6:8931309-8958476 5775 bp
lnc-BMP6-106:141 chr6:8931310-8940971 4004 bp
lnc-BMP6-106:142 chr6:8932819-8940352 2071 bp
lnc-BMP6-106:143 chr6:8933317-8940352 1884 bp
lnc-BMP6-106:144 chr6:8965188-9096238 1458 bp
lnc-BMP6-106:145 chr6:8965315-9096238 1490 bp
lnc-BMP6-106:146 chr6:8965407-9095697 890 bp
lnc-BMP6-106:147 chr6:8984672-9046475 208 bp
lnc-BMP6-106:148 chr6:8992184-9096238 1077 bp
lnc-BMP6-106:149 chr6:8992576-8993709 745 bp
lnc-BMP6-106:15 chr6:8283225-8342455 867 bp
lnc-BMP6-106:150 chr6:9025865-9096668 1663 bp
lnc-BMP6-106:151 chr6:9040845-9096238 1167 bp
lnc-BMP6-106:152 chr6:9041624-9096238 1505 bp
lnc-BMP6-106:153 chr6:9041624-9096238 1296 bp
lnc-BMP6-106:154 chr6:9041625-9096238 1330 bp
lnc-BMP6-106:155 chr6:9041625-9096238 1288 bp
lnc-BMP6-106:156 chr6:9041625-9096238 1727 bp
lnc-BMP6-106:157 chr6:9041625-9096238 1596 bp
lnc-BMP6-106:158 chr6:9041627-9096661 2218 bp
lnc-BMP6-106:159 chr6:9041634-9046478 588 bp
lnc-BMP6-106:16 chr6:8284078-8307530 523 bp
lnc-BMP6-106:160 chr6:9041833-9096238 1547 bp
lnc-BMP6-106:161 chr6:9224594-9226261 1412 bp
lnc-BMP6-106:162 chr6:9225314-9238327 527 bp
lnc-BMP6-106:17 chr6:8328151-8342455 527 bp
lnc-BMP6-106:18 chr6:8329655-8342455 400 bp
lnc-BMP6-106:19 chr6:8435568-9194766 3387 bp
lnc-BMP6-106:2 chr6:8102737-8343139 1400 bp
lnc-BMP6-106:20 chr6:8435578-8785443 1214 bp
lnc-BMP6-106:21 chr6:8435578-8786914 2638 bp
lnc-BMP6-106:22 chr6:8435578-8789617 1856 bp
lnc-BMP6-106:23 chr6:8435578-8785443 1226 bp
lnc-BMP6-106:24 chr6:8435578-8792291 2976 bp
lnc-BMP6-106:25 chr6:8435578-8785443 1337 bp
lnc-BMP6-106:26 chr6:8435582-8786914 2611 bp
lnc-BMP6-106:27 chr6:8435585-8786882 2635 bp
lnc-BMP6-106:28 chr6:8435588-8792283 2883 bp
lnc-BMP6-106:29 chr6:8435589-8841127 3147 bp
lnc-BMP6-106:3 chr6:8102737-8116293 809 bp
lnc-BMP6-106:30 chr6:8435592-8792261 3014 bp
lnc-BMP6-106:31 chr6:8435594-8785444 1286 bp
lnc-BMP6-106:32 chr6:8435602-8785323 1184 bp
lnc-BMP6-106:33 chr6:8435606-8785443 1150 bp
lnc-BMP6-106:34 chr6:8435617-8609046 875 bp
lnc-BMP6-106:35 chr6:8435617-8470041 705 bp
lnc-BMP6-106:36 chr6:8435617-8439995 867 bp
lnc-BMP6-106:37 chr6:8435620-8785433 1103 bp
lnc-BMP6-106:38 chr6:8435620-8785432 1269 bp
lnc-BMP6-106:39 chr6:8435620-8792308 1528 bp
lnc-BMP6-106:4 chr6:8102757-8103185 429 bp
lnc-BMP6-106:40 chr6:8435620-8792306 2851 bp
lnc-BMP6-106:41 chr6:8435623-8785445 1183 bp
lnc-BMP6-106:42 chr6:8435623-8712293 2369 bp
lnc-BMP6-106:43 chr6:8435623-8841108 3133 bp
lnc-BMP6-106:44 chr6:8435624-8785433 1556 bp
lnc-BMP6-106:45 chr6:8435627-8785443 1599 bp
lnc-BMP6-106:46 chr6:8435627-8792311 1542 bp
lnc-BMP6-106:47 chr6:8435627-8785442 1274 bp
lnc-BMP6-106:48 chr6:8435629-8438498 1086 bp
lnc-BMP6-106:49 chr6:8435629-8790298 2528 bp
lnc-BMP6-106:5 chr6:8102757-8105206 2450 bp
lnc-BMP6-106:50 chr6:8435631-8785445 1317 bp
lnc-BMP6-106:51 chr6:8435631-8653802 1055 bp
lnc-BMP6-106:52 chr6:8435636-8857942 2225 bp
lnc-BMP6-106:53 chr6:8435638-9239687 2882 bp
lnc-BMP6-106:54 chr6:8435638-8785443 1205 bp
lnc-BMP6-106:55 chr6:8435638-8611044 2793 bp
lnc-BMP6-106:56 chr6:8435638-8470725 1368 bp
lnc-BMP6-106:57 chr6:8435638-9225381 1844 bp
lnc-BMP6-106:58 chr6:8435638-8940348 2821 bp
lnc-BMP6-106:59 chr6:8435639-8785444 1252 bp
lnc-BMP6-106:6 chr6:8102757-8116853 1245 bp
lnc-BMP6-106:60 chr6:8435640-8475219 2415 bp
lnc-BMP6-106:61 chr6:8435640-8471005 1623 bp
lnc-BMP6-106:62 chr6:8435640-8792264 2925 bp
lnc-BMP6-106:63 chr6:8435640-8653796 919 bp
lnc-BMP6-106:64 chr6:8435641-8792311 1281 bp
lnc-BMP6-106:65 chr6:8435641-8841253 3341 bp
lnc-BMP6-106:66 chr6:8435641-9225324 1429 bp
lnc-BMP6-106:67 chr6:8435641-9227650 3529 bp
lnc-BMP6-106:68 chr6:8435641-8786348 2079 bp
lnc-BMP6-106:69 chr6:8435644-8861999 2976 bp
lnc-BMP6-106:7 chr6:8102757-8136290 1603 bp
lnc-BMP6-106:70 chr6:8435645-8466636 861 bp
lnc-BMP6-106:71 chr6:8435645-8471004 1617 bp
lnc-BMP6-106:72 chr6:8435645-8501312 662 bp
lnc-BMP6-106:73 chr6:8435645-8784218 713 bp
lnc-BMP6-106:74 chr6:8435645-8838822 758 bp
lnc-BMP6-106:75 chr6:8435645-8875024 3568 bp
lnc-BMP6-106:76 chr6:8435645-9287482 2151 bp
lnc-BMP6-106:77 chr6:8435645-8756727 2604 bp
lnc-BMP6-106:78 chr6:8435646-8785442 1196 bp
lnc-BMP6-106:79 chr6:8435646-8862080 2805 bp
lnc-BMP6-106:8 chr6:8102757-8153204 401 bp
lnc-BMP6-106:80 chr6:8435646-8841224 3302 bp
lnc-BMP6-106:81 chr6:8435647-8792307 1457 bp
lnc-BMP6-106:82 chr6:8435648-8785442 1274 bp
lnc-BMP6-106:83 chr6:8435648-8785442 1127 bp
lnc-BMP6-106:84 chr6:8435654-9226156 2257 bp
lnc-BMP6-106:85 chr6:8435659-8653793 958 bp
lnc-BMP6-106:86 chr6:8435659-8785432 1171 bp
lnc-BMP6-106:87 chr6:8435659-8653776 948 bp
lnc-BMP6-106:88 chr6:8435659-8785442 1204 bp
lnc-BMP6-106:89 chr6:8435659-8785443 1339 bp
lnc-BMP6-106:9 chr6:8102764-8342455 610 bp
lnc-BMP6-106:90 chr6:8435659-8792311 1569 bp
lnc-BMP6-106:91 chr6:8435663-9227098 3163 bp
lnc-BMP6-106:92 chr6:8435663-8792264 2843 bp
lnc-BMP6-106:93 chr6:8435693-8712286 2292 bp
lnc-BMP6-106:94 chr6:8435693-9227131 3277 bp
lnc-BMP6-106:95 chr6:8435693-8792252 2806 bp
lnc-BMP6-106:96 chr6:8435705-8792259 2936 bp
lnc-BMP6-106:97 chr6:8435710-8792263 2777 bp
lnc-BMP6-106:98 chr6:8435712-8789677 1694 bp
lnc-BMP6-106:99 chr6:8435712-8985789 1208 bp


Locus conservation

Locus conservation?
lnc-BMP6-106 no no no no

Available literature

  1. Lu (2016), Long non-coding RNA HULC promotes tumor angiogenesis in liver cancer by up-regulating sphingosine kinase 1 (SPHK1)., Oncotarget
  2. Wan (2016), miR-203 suppresses the proliferation and metastasis of hepatocellular carcinoma by targeting oncogene ADAM9 and oncogenic long non-coding RNA HULC., Anticancer Agents Med Chem
  3. Xie (2016), Long non-coding RNAs in colorectal cancer., Oncotarget
  4. Ching (2015), Non-coding yet non-trivial: a review on the computational genomics of lincRNAs., BioData Min
  5. Conigliaro (2015), CD90+ liver cancer cells modulate endothelial cell phenotype through the release of exosomes containing H19 lncRNA., Mol. Cancer
  6. Cui (2015), Long noncoding RNA HULC modulates abnormal lipid metabolism in hepatoma cells through an miR-9-mediated RXRA signaling pathway., Cancer Res.
  7. Cui (2015), A long noncoding RNA perturbs the circadian rhythm of hepatoma cells to facilitate hepatocarcinogenesis., Neoplasia
  8. Gandhy (2015), Specificity protein (Sp) transcription factors and metformin regulate expression of the long non-coding RNA HULC., Oncotarget
  9. Ge (2015), MiRNA-192 [corrected] and miRNA-204 Directly Suppress lncRNA HOTTIP and Interrupt GLS1-Mediated Glutaminolysis in Hepatocellular Carcinoma., PLoS Genet.
  10. Guerrieri (2015), Long non-coding RNAs era in liver cancer., World J Hepatol
  11. Gui (2015), Long Noncoding RNA CUDR Regulates HULC and β-Catenin to Govern Human Liver Stem Cell Malignant Differentiation., Mol. Ther.
  12. Guo (2015), Comprehensive analysis of lncRNA-mRNA co-expression patterns identifies immune-associated lncRNA biomarkers in ovarian cancer malignant progression., Sci Rep
  13. Huang (2015), Long non-coding RNA ANRIL is upregulated in hepatocellular carcinoma and regulates cell apoptosis by epigenetic silencing of KLF2., J Hematol Oncol
  14. Huang (2015), Long non-coding RNA TUG1 is up-regulated in hepatocellular carcinoma and promotes cell growth and apoptosis by epigenetically silencing of KLF2., Mol. Cancer
  15. Huang (2015), HBx-related long non-coding RNA DBH-AS1 promotes cell proliferation and survival by activating MAPK signaling in hepatocellular carcinoma., Oncotarget
  16. Jiang (2015), LncRNA2Function: a comprehensive resource for functional investigation of human lncRNAs based on RNA-seq data., BMC Genomics
  17. Kang (2015), Long noncoding RNAs POLR2E rs3787016 C/T and HULC rs7763881 A/C polymorphisms are associated with decreased risk of esophageal cancer., Tumour Biol.
  18. Li (2015), MDR1 will play a key role in pharmacokinetic changes under hypoxia at high altitude and its potential regulatory networks., Drug Metab. Rev.
  19. Li (2015), HULC and Linc00152 Act as Novel Biomarkers in Predicting Diagnosis of Hepatocellular Carcinoma., Cell. Physiol. Biochem.
  20. Liu (2015), Carboplatin-docetaxel-induced activity against ovarian cancer is dependent on up-regulated lncRNA PVT1., Int J Clin Exp Pathol
  21. Liu (2015), Ultrasensitive strategy based on PtPd nanodendrite/nano-flower-like@GO signal amplification for the detection of long non-coding RNA., Biosens Bioelectron
  22. Peng (2015), Long non-coding RNA MEG3 functions as a competing endogenous RNA to regulate gastric cancer progression., J. Exp. Clin. Cancer Res.
  23. Ragusa (2015), Non-coding landscapes of colorectal cancer., World J. Gastroenterol.
  24. Ren (2015), Association of long non-coding RNA HOTTIP with progression and prognosis in colorectal cancer., Int J Clin Exp Pathol
  25. Shen (2015), Exploration of Deregulated Long Non-Coding RNAs in Association with Hepatocarcinogenesis and Survival., Cancers (Basel)
  26. Shi (2015), Microvascular invasion in hepatocellular carcinoma overexpression promotes cell proliferation and inhibits cell apoptosis of hepatocellular carcinoma via inhibiting miR-199a expression., Onco Targets Ther
  27. Sun (2015), Increased expression of lncRNA HULC indicates a poor prognosis and promotes cell metastasis in osteosarcoma., Int J Clin Exp Pathol
  28. Wang (2015), Serum LncRNAs Profiles Serve as Novel Potential Biomarkers for the Diagnosis of HBV-Positive Hepatocellular Carcinoma., PLoS ONE
  29. Yang (2015), LincRNA-p21 activates endoplasmic reticulum stress and inhibits hepatocellular carcinoma., Oncotarget
  30. Yu (2015), Long non-coding RNAs and hepatocellular carcinoma., Mol Clin Oncol
  31. Zhang (2015), Long Noncoding RNA Expression Signatures of Metastatic Nasopharyngeal Carcinoma and Their Prognostic Value., Biomed Res Int
  32. Zhang (2015), Molecular mechanism of HEIH and HULC in the proliferation and invasion of hepatoma cells., Int J Clin Exp Med
  33. Zhao (2015), LncRNA HULC affects the differentiation of Treg in HBV-related liver cirrhosis., Int. Immunopharmacol.
  34. Zhou (2015), Identification of the long non-coding RNA H19 in plasma as a novel biomarker for diagnosis of gastric cancer., Sci Rep
  35. Chiyomaru (2014), Long non-coding RNA HOTAIR is targeted and regulated by miR-141 in human cancer cells., J. Biol. Chem.
  36. Das (2014), lnCeDB: database of human long noncoding RNA acting as competing endogenous RNA., PLoS ONE
  37. Ghosal (2014), HumanViCe: host ceRNA network in virus infected cells in human., Front Genet
  38. Guo (2014), BRAF-activated long non-coding RNA contributes to colorectal cancer migration by inducing epithelial-mesenchymal transition., Oncol Lett
  39. Han (2014), LEIGC long non-coding RNA acts as a tumor suppressor in gastric carcinoma by inhibiting the epithelial-to-mesenchymal transition., BMC Cancer
  40. He (2014), Reciprocal regulation of PCGEM1 and miR-145 promote proliferation of LNCaP prostate cancer cells., J. Exp. Clin. Cancer Res.
  41. Huang (2014), Characteristics of long non-coding RNA and its relation to hepatocellular carcinoma., Carcinogenesis
  42. Lau (2014), Viral-human chimeric transcript predisposes risk to liver cancer development and progression., Cancer Cell
  43. Li (2014), Comparison of long non‑coding RNAs, microRNAs and messenger RNAs involved in initiation and progression of esophageal squamous cell carcinoma., Mol Med Rep
  44. Ma (2014), Long non-coding RNA HOTAIR, a c-Myc activated driver of malignancy, negatively regulates miRNA-130a in gallbladder cancer., Mol. Cancer
  45. Malek (2014), Correlation of long non-coding RNA expression with metastasis, drug resistance and clinical outcome in cancer., Oncotarget
  46. Peng (2014), Long noncoding RNA HULC is a novel biomarker of poor prognosis in patients with pancreatic cancer., Med. Oncol.
  47. Su (2014), Comprehensive analysis of long non-coding RNAs in human breast cancer clinical subtypes., Oncotarget
  48. Tong (2014), Association of decreased expression of long non-coding RNA LOC285194 with chemoradiotherapy resistance and poor prognosis in esophageal squamous cell carcinoma., J Transl Med
  49. Xu (2014), Long non-coding RNA URHC regulates cell proliferation and apoptosis via ZAK through the ERK/MAPK signaling pathway in hepatocellular carcinoma., Int. J. Biol. Sci.
  50. Zhao (2014), Role of long non-coding RNA HULC in cell proliferation, apoptosis and tumor metastasis of gastric cancer: a clinical and in vitro investigation., Oncol. Rep.
  51. Zhao (2014), Role of HOTAIR long noncoding RNA in metastatic progression of lung cancer., Eur Rev Med Pharmacol Sci
  52. Du (2013), Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer., Nat. Struct. Mol. Biol.
  53. Hämmerle (2013), Posttranscriptional destabilization of the liver-specific long noncoding RNA HULC by the IGF2 mRNA-binding protein 1 (IGF2BP1)., Hepatology
  54. Jalali (2013), Systematic transcriptome wide analysis of lncRNA-miRNA interactions., PLoS ONE
  55. Kapusta (2013), Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs., PLoS Genet.
  56. Kogure (2013), Extracellular Vesicle-Mediated Transfer of a Novel Long Noncoding RNA TUC339: A Mechanism of Intercellular Signaling in Human Hepatocellular Cancer., Genes Cancer
  57. Qiao (2013), LncRNA DQ786243 affects Treg related CREB and Foxp3 expression in Crohn's disease., J. Biomed. Sci.
  58. Su (2013), microRNAs and ceRNAs: RNA networks in pathogenesis of cancer., Chin. J. Cancer Res.
  59. Tang (2013), Long noncoding RNAs-related diseases, cancers, and drugs., ScientificWorldJournal
  60. Tang (2013), Long noncoding RNA HOTAIR is associated with motility, invasion, and metastatic potential of metastatic melanoma., Biomed Res Int
  61. Volders (2013), LNCipedia: a database for annotated human lncRNA transcript sequences and structures., Nucleic Acids Res.
  62. Wan (2013), Long non-coding RNA ANRIL (CDKN2B-AS) is induced by the ATM-E2F1 signaling pathway., Cell. Signal.
  63. Weber (2013), Evaluation of long noncoding RNA MALAT1 as a candidate blood-based biomarker for the diagnosis of non-small cell lung cancer., BMC Res Notes
  64. Wu (2013), Hypomethylation of noncoding DNA regions and overexpression of the long noncoding RNA, AFAP1-AS1, in Barrett's esophagus and esophageal adenocarcinoma., Gastroenterology
  65. Wu (2013), A genetic polymorphism in lincRNA-uc003opf.1 is associated with susceptibility to esophageal squamous cell carcinoma in Chinese populations., Carcinogenesis
  66. Wu (2013), Ets-2 regulates cell apoptosis via the Akt pathway, through the regulation of urothelial cancer associated 1, a long non-coding RNA, in bladder cancer cells., PLoS ONE
  67. Xie (2013), Plasma HULC as a promising novel biomarker for the detection of hepatocellular carcinoma., Biomed Res Int
  68. Du (2012), Elevation of highly up-regulated in liver cancer (HULC) by hepatitis B virus X protein promotes hepatoma cell proliferation via down-regulating p18., J. Biol. Chem.
  69. Jeggari (2012), miRcode: a map of putative microRNA target sites in the long non-coding transcriptome., Bioinformatics
  70. Liu (2012), A genetic variant in long non-coding RNA HULC contributes to risk of HBV-related hepatocellular carcinoma in a Chinese population., PLoS ONE
  71. Scaria (2012), Long Non-Coding RNAs in Infection Biology., Front Genet
  72. Braconi (2011), microRNA-29 can regulate expression of the long non-coding RNA gene MEG3 in hepatocellular cancer., Oncogene
  73. Chan (2011), Genome-wide association study of hepatocellular carcinoma in Southern Chinese patients with chronic hepatitis B virus infection., PLoS ONE
  74. Salmena (2011), A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?, Cell
  75. Tahira (2011), Long noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer., Mol. Cancer