Transcript: lnc-ZWINT-4:2

Basic information

LNCipedia transcript ID: lnc-ZWINT-4:2 
LNCipedia gene ID: lnc-ZWINT-4
Ensembl Gene ID: ENSG00000236744
Ensembl Transcript ID: ENST00000457975
Location (hg38): chr10:55247755-55597233
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 439 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000457975.2
Alternative gene names: ENSG00000236744.2; RP11-168O22.1; AC016822.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.9501 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZWINT-4:2 yes no no no

Available literature

  1. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZWINT-4:2
4.0 lnc-ZWINT-4:2
4.1 lnc-ZWINT-4:2
5.0 lnc-ZWINT-4:2
5.1 lnc-MBL2-4:8
5.2 lnc-ZWINT-4:2