Transcript: lnc-ZWINT-1:1

Basic information

LNCipedia transcript ID: lnc-ZWINT-1:1 
LNCipedia gene ID: lnc-ZWINT-1
Location (hg38): chr10:56151781-56154970
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 354 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018521; NONHSAT013467
Alternative gene names: XLOC_008828; linc-PCDH15


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.2772 non-coding 
CPAT coding probability 5.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZWINT-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZWINT-1:1
3.1 lnc-ZWINT-1:1
4.0 lnc-ZWINT-1:1
4.1 lnc-ZWINT-1:1
5.0 lnc-ZWINT-1:1
5.1 lnc-MBL2-11:1
5.2 lnc-ZWINT-1:1