Transcript: lnc-ZUFSP-3:1

Basic information

LNCipedia transcript ID: lnc-ZUFSP-3:1 
LNCipedia gene ID: lnc-ZUFSP-3
Location (hg38): chr6:116652004-116668794
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1236 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT114658
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 83.9143 coding 
CPAT coding probability 58.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZUFSP-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZUFSP-3:1
4.0 lnc-ZUFSP-3:1
4.1 lnc-ZUFSP-3:1
5.0 lnc-ZUFSP-3:1
5.1 lnc-HDAC2-34:1
5.2 lnc-ZUFSP-3:1