Transcript: lnc-ZSCAN2-2:1

Basic information

LNCipedia transcript ID: lnc-ZSCAN2-2:1 
LNCipedia gene ID: lnc-ZSCAN2-2
Location (hg38): chr15:84527445-84534238
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 282 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023996; NONHSAT047973
Alternative gene names: XLOC_011339; linc-ZSCAN2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -207.9838 non-coding 
CPAT coding probability 7.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZSCAN2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZSCAN2-1:1
3.1 lnc-ZSCAN2-2:1
4.0 lnc-ZSCAN2-2:1
4.1 lnc-ZSCAN2-2:1
5.0 lnc-ZSCAN2-2:1
5.1 lnc-UBE2Q2L-11:1
5.2 lnc-ZSCAN2-2:1