Transcript: lnc-ZNF816-2:17

Basic information

LNCipedia transcript ID: lnc-ZNF816-2:17 
LNCipedia gene ID: lnc-ZNF816-2
Location (hg38): chr19:52965620-52993567
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5664 bp
Exons: 4
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA715:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.8711 non-coding 
CPAT coding probability 48.58% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF816-2:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF816-2:17
4.1 lnc-ZNF816-2:17
5.0 lnc-ZNF816-2:17
5.1 lnc-TMC4-50:3
5.2 lnc-ZNF816-2:17