Transcript: lnc-ZNF791-1:1

Basic information

LNCipedia transcript ID: lnc-ZNF791-1:1 
LNCipedia gene ID: lnc-ZNF791-1
Ensembl Gene ID: ENSG00000230310
Ensembl Transcript ID: ENST00000414548
Location (hg38): chr19:12552597-12553644
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 543 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00026826; ENST00000414548.1; CTD-2192J16.11-001; OTTHUMT00000344080.1; NONHSAT061257
Alternative gene names: XLOC_012972; linc-ZNF791-1; ENSG00000230310.1; CTD-2192J16.11; OTTHUMG00000156402.1; AC010422.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.1792 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF791-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF791-1:1
3.1 lnc-ZNF791-1:1
4.0 lnc-ZNF791-1:1
4.1 lnc-ZNF791-1:1
5.0 lnc-ZNF791-1:1
5.1 lnc-ZNF763-11:5
5.2 lnc-ZNF791-1:1