Transcript: lnc-ZNF782-3:1

Basic information

LNCipedia transcript ID: lnc-ZNF782-3:1 
LNCipedia gene ID: lnc-ZNF782-3
Location (hg38): chr9:96898066-96949585
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 548 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000506067.1; RP11-330M2.7-001; OTTHUMT00000053296.1; NONHSAT133453
Alternative gene names: ENSG00000249044.1; RP11-330M2.7; OTTHUMG00000020309.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.5205 non-coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF782-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HIATL2-1:1
4.0 lnc-HIATL2-1:1
4.1 lnc-HIATL2-1:1
5.0 lnc-HIATL2-1:1
5.1 lnc-FANCC-37:1
5.2 lnc-ZNF782-3:1