Transcript: lnc-ZNF708-14:5

Basic information

LNCipedia transcript ID: lnc-ZNF708-14:5 
LNCipedia gene ID: lnc-ZNF708-14
Ensembl Gene ID: ENSG00000268081
Ensembl Transcript ID: ENST00000594564
Location (hg38): chr19:21554640-21569237
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 447 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT063723; ENST00000594564.1
Alternative gene names: ENSG00000268081.1; RP11-678G14.2; AC123912.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.4523 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF708-14:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF100-3:3
4.0 lnc-ZNF100-3:3
4.1 lnc-ZNF708-14:5
5.0 lnc-ZNF708-14:5
5.1 lnc-PALM3-197:5
5.2 lnc-ZNF708-14:5