Transcript: lnc-ZNF705E-1:15

Basic information

LNCipedia transcript ID: lnc-ZNF705E-1:15 
LNCipedia gene ID: lnc-ZNF705E-1
Ensembl Gene ID: ENSG00000248671
Ensembl Transcript ID: ENST00000511954
Location (hg38): chr11:71794363-71813845
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1574 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000511954.1; CTD-2313N18.5-001; OTTHUMT00000394762.1; ENST00000511954.5
Alternative gene names: ENSG00000248671.2; CTD-2313N18.5; OTTHUMG00000167480.1; ENSG00000248671.3; ENSG00000248671.7; ALG1L9P


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 94.4742 coding 
CPAT coding probability 29.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF705E-1:15 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-849H4.2.1-1:2
4.0 lnc-RP11-849H4.2.1-1:2
4.1 lnc-RP11-849H4.2.1-1:2
5.0 lnc-RP11-849H4.2.1-1:2
5.1 lnc-UCP3-62:15
5.2 lnc-ZNF705E-1:15