Transcript: lnc-ZNF700-1:1

Basic information

LNCipedia transcript ID: lnc-ZNF700-1:1 
LNCipedia gene ID: lnc-ZNF700-1
Ensembl Gene ID: ENSG00000267274
Ensembl Transcript ID: ENST00000586394
Location (hg38): chr19:11939959-11953381
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 468 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT061203; ENST00000586394.1
Alternative gene names: ENSG00000267274.1; CTD-2006C1.12; AC008770.4; AC008770.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.8839 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF700-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF700-1:1
4.0 lnc-ZNF700-1:1
4.1 lnc-ZNF700-1:1
5.0 lnc-ZNF700-1:1
5.1 lnc-ZNF700-1:1
5.2 lnc-ZNF700-1:1