Transcript: lnc-ZNF683-1:5

Basic information

LNCipedia transcript ID: lnc-ZNF683-1:5 
LNCipedia gene ID: lnc-ZNF683-1
RefSeq ID: NR_125952
Location (hg38): chr1:26462756-26467537
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 784 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125952.1
Alternative gene names: LOC101928324


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -69.952 non-coding 
CPAT coding probability 1.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF683-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ZNF683-1:5
5.1 lnc-ZNF683-1:5
5.2 lnc-ZNF683-1:5