Transcript: lnc-ZNF680-5:1

Basic information

LNCipedia transcript ID: lnc-ZNF680-5:1 
LNCipedia gene ID: lnc-ZNF680-5
Location (hg38): chr7:63713673-63715285
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1168 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013179; NONHSAT120928
Alternative gene names: XLOC_006466; linc-ZNF479-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.2559 non-coding 
CPAT coding probability 3.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF680-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF680-5:1
3.1 lnc-ZNF680-5:1
4.0 lnc-ZNF680-5:1
4.1 lnc-ZNF680-5:1
5.0 lnc-ZNF680-5:1
5.1 lnc-PSPH-54:1
5.2 lnc-ZNF680-5:1