Transcript: lnc-ZNF680-4:2

Basic information

LNCipedia transcript ID: lnc-ZNF680-4:2 
LNCipedia gene ID: lnc-ZNF680-4
Location (hg38): chr7:63898879-63900735
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 728 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT120949; ENST00000600182.1; ENST00000594887.1
Alternative gene names: ENSG00000236299.3; RP11-340I6.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.7719 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF680-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF680-4:2
4.0 lnc-ZNF680-4:2
4.1 lnc-ZNF680-4:2
5.0 lnc-ZNF680-4:2
5.1 lnc-PSPH-56:3
5.2 lnc-ZNF680-4:2