Transcript: lnc-ZNF596-6:1

Basic information

LNCipedia transcript ID: lnc-ZNF596-6:1 
LNCipedia gene ID: lnc-ZNF596-6
Location (hg38): chr8:474455-477966
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3512 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT124597; NONHSAT124598; ENST00000607352.1
Alternative gene names: ENSG00000272005.1; RP11-91J19.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.3342 non-coding 
CPAT coding probability 2.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF596-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXO25-6:1
4.0 lnc-FBXO25-6:1
4.1 lnc-FBXO25-6:1
5.0 lnc-FBXO25-6:1
5.1 lnc-DEFB106A-117:1
5.2 lnc-ZNF596-6:1