Transcript: lnc-ZNF573-1:4

Basic information

LNCipedia transcript ID: lnc-ZNF573-1:4 
LNCipedia gene ID: lnc-ZNF573-1
RefSeq ID: NR_040015
Location (hg38): chr19:37823722-37855196
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1716 bp
Exons: 6
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000592640.1; ENST00000592640.5; NR_040015.1
Alternative gene names: ENSG00000225868.2; AC016582.2; ENSG00000225868.6; LOC100631378


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.9817 non-coding 
CPAT coding probability 97.98% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF573-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF573-1:4
4.0 lnc-ZNF573-1:4
4.1 lnc-ZNF573-1:4
5.0 lnc-ZNF573-1:4
5.1 lnc-ZFP30-8:5
5.2 lnc-ZNF573-1:4