Transcript: lnc-ZNF573-1:1

Basic information

LNCipedia transcript ID: lnc-ZNF573-1:1 
LNCipedia gene ID: lnc-ZNF573-1
Location (hg38): chr19:37825158-37855196
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 631 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000433142; ENST00000433142.1; AC016582.2-001; OTTHUMT00000109619.1
Alternative gene names: ENSG00000225868; AC016582.2; ENSG00000225868.1; OTTHUMG00000048186.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.3435 non-coding 
CPAT coding probability 27.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF573-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF573-1:1
3.1 lnc-ZNF573-1:1
4.0 lnc-ZNF573-1:1
4.1 lnc-ZNF573-1:1
5.0 lnc-ZNF573-1:1
5.1 lnc-ZFP30-8:3
5.2 lnc-ZNF573-1:1