Transcript: lnc-ZNF516-4:4

Basic information

LNCipedia transcript ID: lnc-ZNF516-4:4 
LNCipedia gene ID: lnc-ZNF516-4
Location (hg38): chr18:76254363-76255256
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 894 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000265717.1|ENCT00000199018.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.3441 non-coding 
CPAT coding probability 7.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF516-4:4 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF516-4:4
5.0 lnc-ZNF516-4:4
5.1 lnc-PQLC1-32:5
5.2 lnc-ZNF516-4:4