Transcript: lnc-ZNF485-68:1

Basic information

LNCipedia transcript ID: lnc-ZNF485-68:1 
HGNC Gene Symbol: lnc-ZNF485-68    
HGNC Full Gene Name: long intergenic non-protein coding RNA 619
Ensembl Gene ID: ENSG00000204187
Ensembl Transcript ID: ENST00000374432
RefSeq ID: NR_033923
Location (hg38): chr10:43845306-43850622
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1121 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT012997; NR_033923; ENST00000374432.3; NR_033923.1
Alternative gene names: ENSG00000204187.5; LINC00619; bA168P8.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.2612 non-coding 
CPAT coding probability 10.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF485-68:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf136-2:1
4.0 LINC00619:1
4.1 LINC00619:1
5.0 LINC00619:1
5.1 lnc-NPY4R2-68:1
5.2 lnc-ZNF485-68:1