Transcript: lnc-ZNF473-1:3

Basic information

LNCipedia transcript ID: lnc-ZNF473-1:3 
LNCipedia gene ID: lnc-ZNF473-1
Location (hg38): chr19:50050589-50062130
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 879 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000204666.3|FTMT27500023888.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.1812 non-coding 
CPAT coding probability 51.57% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF473-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF473-1:3
5.0 lnc-ZNF473-1:3
5.1 lnc-PRRG2-25:2
5.2 lnc-ZNF473-1:3