Transcript: lnc-ZNF423-1:1

Basic information

LNCipedia transcript ID: lnc-ZNF423-1:1 
LNCipedia gene ID: lnc-ZNF423-1
Ensembl Gene ID: ENSG00000262950
Ensembl Transcript ID: ENST00000576671
Location (hg38): chr16:49442910-49454078
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 674 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000576671.1; RP11-189E14.5-001; OTTHUMT00000423255.1; NONHSAT142375
Alternative gene names: ENSG00000262950.1; RP11-189E14.5; OTTHUMG00000173488.1; AC007861.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.1226 non-coding 
CPAT coding probability 18.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF423-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF423-1:1
4.0 lnc-ZNF423-1:1
4.1 lnc-ZNF423-1:1
5.0 lnc-ZNF423-1:1
5.1 lnc-CFAP20-148:1
5.2 lnc-ZNF423-1:1