Transcript: lnc-ZNF397-4:5

Basic information

LNCipedia transcript ID: lnc-ZNF397-4:5 
LNCipedia gene ID: lnc-ZNF397-4
Location (hg38): chr18:35290306-35310632
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4966 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA634:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.0699 non-coding 
CPAT coding probability 99.99% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF397-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF397-4:5
4.1 lnc-ZNF397-4:5
5.0 lnc-ZNF397-4:5
5.1 lnc-RIOK3-175:3
5.2 lnc-ZNF397-4:5