Transcript: lnc-ZNF33B-3:2

Basic information

LNCipedia transcript ID: lnc-ZNF33B-3:2 
LNCipedia gene ID: lnc-ZNF33B-3
Location (hg38): chr10:42581594-42638553
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1941 bp
Exons: 6
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT012907; ENST00000486187.1
Alternative gene names: ENSG00000272373.1; ZNF33B


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 15.3692 non-coding 
CPAT coding probability 5.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF33B-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF33B-3:2
4.0 lnc-ZNF33B-3:2
4.1 lnc-ZNF33B-3:2
5.0 lnc-ZNF33B-3:2
5.1 lnc-LRRC18-102:5
5.2 lnc-ZNF33B-3:2