Transcript: lnc-ZNF32-4:1

Basic information

LNCipedia transcript ID: lnc-ZNF32-4:1 
LNCipedia gene ID: lnc-ZNF32-4
Location (hg38): chr10:43913899-43914506
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 465 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00017962; ENST00000431987; ENST00000431987.1; RP11-168P8.4-001; OTTHUMT00000047734.1; NONHSAT013014
Alternative gene names: XLOC_008793; linc-ZNF32-3; ENSG00000223992; RP11-168P8.4; ENSG00000223992.1; OTTHUMG00000018051.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -225.3489 non-coding 
CPAT coding probability 30.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF32-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF32-4:1
3.1 lnc-ZNF32-4:1
4.0 lnc-ZNF32-4:1
4.1 lnc-ZNF32-4:1
5.0 lnc-ZNF32-4:1
5.1 lnc-LRRC18-86:1
5.2 lnc-ZNF32-4:1