Transcript: lnc-ZNF316-2:1

Basic information

LNCipedia transcript ID: lnc-ZNF316-2:1 
LNCipedia gene ID: lnc-ZNF316-2
Location (hg38): chr7:6654864-6656432
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1569 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000564837.1; RP11-611L7.1-001; OTTHUMT00000422618.1; NONHSAT119053
Alternative gene names: ENSG00000260054.1; RP11-611L7.1; OTTHUMG00000173253.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.6861 non-coding 
CPAT coding probability 1.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF316-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC073343.1-2:1
4.0 lnc-AC073343.1-2:1
4.1 lnc-AC073343.1-2:1
5.0 lnc-AC073343.1-2:1
5.1 lnc-SLC29A4-26:1
5.2 lnc-ZNF316-2:1