Transcript: lnc-ZNF26-12:6

Basic information

LNCipedia transcript ID: lnc-ZNF26-12:6 
LNCipedia gene ID: lnc-ZNF26-12
Location (hg38): chr12:132911470-132914732
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2755 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000503695; ENST00000503695.2; RP11-46H11.3-001; OTTHUMT00000397133.1; NONHSAT032143
Alternative gene names: ENSG00000250790; RP11-46H11.3; ENSG00000250790.2; OTTHUMG00000167933.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.1261 non-coding 
CPAT coding probability 3.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF26-12:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF26-1:2
3.1 lnc-ZNF26-1:2
4.0 lnc-ZNF26-1:2
4.1 lnc-ZNF26-1:2
5.0 lnc-ZNF26-1:2
5.1 lnc-PGAM5-5:6
5.2 lnc-ZNF26-12:6