Transcript: lnc-ZNF146-1:10

Basic information

LNCipedia transcript ID: lnc-ZNF146-1:10 
LNCipedia gene ID: lnc-ZNF146-1
Ensembl Gene ID: ENSG00000267053
Ensembl Transcript ID: ENST00000590845
Location (hg38): chr19:36307198-36312660
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 439 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT065975; ENST00000590845.1
Alternative gene names: ENSG00000267053.2; CTD-3162L10.1; ENSG00000267053.6; AC012617.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.5215 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF146-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF146-1:10
4.0 lnc-ZNF146-1:10
4.1 lnc-ZNF146-1:10
5.0 lnc-ZNF146-1:10
5.1 lnc-ZNF345-19:4
5.2 lnc-ZNF146-1:10