Transcript: lnc-ZMYND8-11:1

Basic information

LNCipedia transcript ID: lnc-ZMYND8-11:1 
LNCipedia gene ID: lnc-ZMYND8-11
Location (hg38): chr20:47360343-47360858
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 516 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000054976.1|FTMT27800001819.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1048.5387 non-coding 
CPAT coding probability 11.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZMYND8-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZMYND8-11:1
5.0 lnc-ZMYND8-11:1
5.1 lnc-SULF2-16:1
5.2 lnc-ZMYND8-11:1