Transcript: lnc-ZIC5-3:1

Basic information

LNCipedia transcript ID: lnc-ZIC5-3:1 
LNCipedia gene ID: lnc-ZIC5-3
Location (hg38): chr13:100085955-100088942
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1083 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00022099
Alternative gene names: XLOC_010709; linc-ZIC5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -9.7555 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZIC5-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZIC5-2:1
3.1 lnc-ZIC5-3:1
4.0 lnc-ZIC5-3:1
4.1 lnc-ZIC5-3:1
5.0 lnc-ZIC5-3:1
5.1 lnc-IRS2-43:5
5.2 lnc-ZIC5-3:1