Transcript: lnc-ZFC3H1-16:2

Basic information

LNCipedia transcript ID: lnc-ZFC3H1-16:2 
LNCipedia gene ID: lnc-ZFC3H1-16
Location (hg38): chr12:71683508-71686038
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2531 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000012430.1|ENCT00000103814.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.7304 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZFC3H1-16:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZFC3H1-16:2
5.0 lnc-ZFC3H1-16:2
5.1 lnc-LRRC10-23:2
5.2 lnc-ZFC3H1-16:2