Transcript: lnc-ZEB2-22:1

Basic information

LNCipedia transcript ID: lnc-ZEB2-22:1 
LNCipedia gene ID: lnc-ZEB2-22
Location (hg38): chr2:144655768-144659887
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4120 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000050219.1|FTMT20600008959.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.806 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZEB2-22:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZEB2-22:1
5.0 lnc-ZEB2-22:1
5.1 lnc-MMADHC-65:1
5.2 lnc-ZEB2-22:1