Transcript: lnc-ZDHHC9-1:2

Basic information

LNCipedia transcript ID: lnc-ZDHHC9-1:2 
LNCipedia gene ID: lnc-ZDHHC9-1
Location (hg38): chrX:129866107-129933830
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3544 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235189.1|MICT00000379946.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.0119 non-coding 
CPAT coding probability 3.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZDHHC9-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZDHHC9-1:2
5.0 lnc-ZDHHC9-1:2
5.1 lnc-HS6ST2-22:2
5.2 lnc-ZDHHC9-1:2