Transcript: lnc-ZDHHC7-3:1

Basic information

LNCipedia transcript ID: lnc-ZDHHC7-3:1 
LNCipedia gene ID: lnc-ZDHHC7-3
Location (hg38): chr16:84889209-84907725
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4303 bp
Exons: 11
Sources: Nielsen et al.,2014
Alternative transcript names: l_1377_chr16:84922814-84924320_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.7363 non-coding 
CPAT coding probability 0.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZDHHC7-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZDHHC7-3:1
4.0 lnc-ZDHHC7-3:1
4.1 lnc-ZDHHC7-3:1
5.0 lnc-ZDHHC7-3:1
5.1 lnc-MTHFSD-34:1
5.2 lnc-ZDHHC7-3:1