Transcript: lnc-ZDHHC17-18:1

Basic information

LNCipedia transcript ID: lnc-ZDHHC17-18:1 
LNCipedia gene ID: lnc-ZDHHC17-18
Location (hg38): chr12:77065796-77067399
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1604 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000009606.1|ENCT00000093388.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -77.6528 non-coding 
CPAT coding probability 12.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZDHHC17-18:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZDHHC17-18:1
5.0 lnc-ZDHHC17-18:1
5.1 lnc-SYT1-21:1
5.2 lnc-ZDHHC17-18:1