Transcript: lnc-ZDHHC14-2:2

Basic information

LNCipedia transcript ID: lnc-ZDHHC14-2:2 
LNCipedia gene ID: lnc-ZDHHC14-2
Location (hg38): chr6:157716058-157789433
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 353 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012620; NONHSAT115719
Alternative gene names: XLOC_005516; linc-SNX9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -157.1316 non-coding 
CPAT coding probability 2.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZDHHC14-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SNX9-1:1
3.1 lnc-SNX9-2:1
4.0 lnc-SNX9-2:1
4.1 lnc-SNX9-2:1
5.0 lnc-SNX9-2:1
5.1 lnc-GTF2H5-7:1
5.2 lnc-ZDHHC14-2:2