Transcript: lnc-ZCCHC17-15:3

Basic information

LNCipedia transcript ID: lnc-ZCCHC17-15:3 
LNCipedia gene ID: lnc-ZCCHC17-15
Location (hg38): chr1:30602330-30606260
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 308 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_37_chr1:31075176-31079107_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.4985 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZCCHC17-15:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZCCHC17-15:3
4.0 lnc-ZCCHC17-15:3
4.1 lnc-ZCCHC17-15:3
5.0 lnc-ZCCHC17-15:3
5.1 lnc-ZCCHC17-15:3
5.2 lnc-ZCCHC17-15:3