Transcript: lnc-ZBTB7C-10:1

Basic information

LNCipedia transcript ID: lnc-ZBTB7C-10:1 
LNCipedia gene ID: lnc-ZBTB7C-10
Location (hg38): chr18:47820295-47830119
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 6637 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026518; NONHSAT059173
Alternative gene names: XLOC_012839; linc-IER3IP1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.6905 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZBTB7C-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SMAD2-1:1
3.1 lnc-SMAD2-1:1
4.0 lnc-SMAD2-1:1
4.1 lnc-SMAD2-1:1
5.0 lnc-SMAD2-1:1
5.1 lnc-DYM-27:1
5.2 lnc-ZBTB7C-10:1